STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17645.1Protoporphyrinogen oxidase protein. (421 aa)    
Predicted Functional Partners:
ERJ17644.1
Putative cyclopropane-cyclopropene fatty acid synthesis protein.
  
 0.995
ERJ17643.1
Tocopherol O-methyltransferase protein.
  
 0.994
ERJ17928.1
Sterol 24-C-methyltransferase protein.
  
 0.966
ERJ18384.1
Putative conserved transmembrane protein.
    0.944
ERJ17642.1
1-acyl-sn-glycerol-3-phosphate acyltransferase protein.
 
   
 0.907
ERJ18385.1
Tocopherol O-methyltransferase protein.
 
  
 0.788
ERJ17638.1
1-deoxy-D-xylulose-5-phosphate reductoisomerase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
   
 0.641
mdh
Malate dehydrogenase protein; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.434
ERJ19597.1
Transcription negative regulator ChrR protein.
  
  
 0.426
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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