STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17604.1Metal dependent phosphohydrolase protein. (401 aa)    
Predicted Functional Partners:
ERJ19477.1
GGDEF domain protein.
 
  0.949
ERJ19430.1
Sensor histidine kinase protein.
 
  0.945
ERJ18457.1
Putative regulatory protein.
 
 0.943
ERJ19427.1
Diguanylate cyclase protein.
 
  0.929
ERJ20767.1
Diguanylate cyclase protein.
 
      0.899
ERJ18109.1
GGDEF domain protein.
 
 
  0.895
ERJ20234.1
Two-component system chemotaxis family CheB-CheR fusion protein.
 0.879
ERJ18625.1
Putative diguanylate cyclase GGDEF domain protein.
 
 
  0.877
ERJ20101.1
Response regulator receiver modulated diguanylate cyclase protein.
 
 0.870
ERJ18180.1
Two-component system chemotaxis family CheB-CheR fusion protein.
 0.868
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.