STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17559.1Serine-pyruvate transaminase protein; Overlaps CDS with the same product name. (87 aa)    
Predicted Functional Partners:
ERJ17558.1
Serine-pyruvate transaminase protein; Overlaps another CDS with the same product name.
     0.994
glcD
Glycolate oxidase subunit protein.
 
 
 0.921
ERJ19542.1
Putative C4-dicarboxylate transporter small permease protein.
 
     0.701
lpdA
Dihydrolipoyl dehydrogenase protein.
   
 
 0.692
metH
Methionine synthase protein.
  
 
  0.669
metH2
5-methyltetrahydrofolate-homocysteine methyltransferase protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.669
degQ
Serine endoprotease protein; Belongs to the peptidase S1C family.
    
  0.623
ERJ18280.1
Serine protease Do protein; Belongs to the peptidase S1C family.
    
  0.621
prpB
Putative carboxyphosphonoenolpyruvate phosphonomutase protein; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
  
 
 0.578
dadA
D-amino acid dehydrogenase small subunit protein.
  
 
 0.565
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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