STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaDPhenylacetic acid degradation protein; Overlaps another CDS with the same product name. (178 aa)    
Predicted Functional Partners:
paaB
Phenylacetic acid degradation protein; Overlaps another CDS with the same product name.
 
 0.999
paaA
Phenylacetic acid degradation protein.
 
 
 0.999
paaE
Putative phenylacetic acid degradation NADH oxidoreductase PaaE protein.
 
 0.998
paaC
Phenylacetic acid degradation protein; Overlaps another CDS with the same product name.
 
 0.998
ERJ17575.1
Phenylacetic acid catabolic family protein.
 
 
 0.966
paaG
Putative enoyl-CoA hydratase protein.
 
 
 0.956
ERJ17572.1
Phenylacetic acid degradation protein.
 
 
 0.954
paaZ
Bifunctional protein PaaZ.
 
  
 0.933
paaK
Phenylacetate-coenzyme A ligase protein; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 0.923
ERJ17576.1
2Fe-2S iron-sulfur cluster binding domain protein.
 
 
 0.911
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.