STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17539.1Glycoprotein 3-alpha-L-fucosyltransferase. (365 aa)    
Predicted Functional Partners:
ERJ17536.1
Glycoprotein 3-alpha-L-fucosyltransferase.
     0.894
ERJ17434.1
UDP-glucoseLPS alpha-13-glucosyltransferase protein.
  
     0.767
ERJ18330.1
Glycoprotein 3-alpha-L-fucosyltransferase.
  
     0.762
ERJ17435.1
Glycoprotein 3-alpha-L-fucosyltransferase.
  
     0.752
ERJ17540.1
12-diacylglycerol 3-glucosyltransferase protein.
    
0.749
waaF
Putative ADP-heptose--LPS heptosyltransferase II protein.
 
 
 0.700
ERJ18331.1
Glycoprotein 3-alpha-L-fucosyltransferase; Overlaps CDS with the same product name.
  
     0.699
xanB
Xanthan biosynthesis protein XanB; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.689
ERJ18329.1
Asparagine synthase protein.
  
  0.630
ERJ17535.1
Glycosyl transferase group 1 protein.
  
     0.618
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.