STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17471.1Heavy metal efflux pump permease component CzcA family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1034 aa)    
Predicted Functional Partners:
ERJ17472.1
Cation efflux family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  0.970
ERJ17473.1
Outer membrane protein CzcC.
 
 
  0.905
ERJ19871.1
Metal ion efflux pump RND family membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.882
czcB
Cation efflux system protein; Overlaps another CDS with the same product name.
 
 0.858
ERJ17474.1
Efflux pump RND family outer membrane protein.
  
 
  0.829
ERJ19135.1
Cation efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.820
ERJ19182.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.768
czcC
Cation efflux system protein; Overlaps another CDS with the same product name.
 
 
 0.760
ERJ19872.1
Outer membrane efflux protein.
 
  0.698
ERJ19735.1
Efflux transporter RND family MFP subunit protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 0.590
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.