STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17448.1acetyl-CoA C-acetyltransferase protein; Overlaps CDS with the same product name. (115 aa)    
Predicted Functional Partners:
fadJ
Fatty acid oxidation complex subunit alpha protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.996
fadB
Fatty acid oxidation complex subunit alpha protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.996
ERJ19358.1
3-hydroxyacyl-CoA dehydrogenase protein; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.996
ERJ17447.1
acetyl-CoA C-acetyltransferase protein; Overlaps another CDS with the same product name.
  
  0.996
mvaS
Hydroxymethylglutaryl-CoA synthase protein.
  
 0.909
ERJ17445.1
Thioesterase superfamily protein.
 
     0.836
ERJ17446.1
Menaquinone-specific isochorismate synthase protein.
 
     0.820
ERJ18753.1
methylmalonyl-CoA carboxyltransferase protein.
 
 
 0.812
ERJ17449.1
Isoquinoline 1-oxidoreductase protein.
 
 
  0.773
ERJ19631.1
enoyl-CoA hydratase protein.
  
  0.756
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.