STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ17439.1Nitrate reductase 2 alpha subunit protein. (164 aa)    
Predicted Functional Partners:
sitA
ABC Mn+2-Fe+2 transporter periplasmic substrate-binding protein SitA; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.823
sitB
ABC Mn+2-Fe+2 transporter ATPase subunit SitB protein.
  
 
 0.816
nfi
Endonuclease V protein; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
       0.773
ERJ17436.1
Hypothetical protein.
       0.714
waaF
Putative ADP-heptose--LPS heptosyltransferase II protein.
       0.714
aroE
Shikimate dehydrogenase protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
       0.714
sitC
ABC Mn+2-Fe+2 transporter inner membrane subunit SitC protein.
  
 
 0.627
sitD
ABC Mn+2-Fe+2 transporter inner membrane subunit SitD protein.
  
 
 0.627
mshA
D-inositol 3-phosphate glycosyltransferase protein.
       0.522
ERJ17434.1
UDP-glucoseLPS alpha-13-glucosyltransferase protein.
       0.522
Your Current Organism:
Salinisphaera shabanensis
NCBI taxonomy Id: 1033802
Other names: S. shabanensis E1L3A, Salinisphaera shabanensis E1L3A, Salinisphaera shabanensis str. E1L3A, Salinisphaera shabanensis strain E1L3A
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