STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoCDeoxyribose-phosphate aldolase protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (220 aa)    
Predicted Functional Partners:
deoB
Phosphopentomutase Carbohydrate transport protein; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.
 
 0.994
ERJ12997.1
Phosphomannomutase Carbohydrate transport protein.
 
 
 0.929
ERJ11469.1
Ribose 5-phosphate isomerase B protein.
 
 
 0.889
adhE
Aldehyde-alcohol dehydrogenase protein; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.884
deoD
Purine nucleoside phosphorylase DeoD-type protein.
 
  
 0.829
ERJ12826.1
Pyrimidine-nucleoside phosphorylase protein.
 
 
 0.828
ptsG
PTS system glucose-specific EIICBA component protein.
    
 0.786
ERJ13350.1
Putative pyruvate-flavodoxin oxidoreductase protein.
  
 
  0.749
ERJ13351.1
Putative pyruvate-flavodoxin oxidoreductase protein; Overlaps CDS with the same product name.
  
 
  0.749
ERJ13352.1
Putative pyruvate-flavodoxin oxidoreductase protein; Overlaps CDS with the same product name.
  
 
  0.749
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.