STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnhCRibonuclease HIII protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (313 aa)    
Predicted Functional Partners:
rnhB
Ribonuclease HII protein; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
 0.710
recU
Holliday junction resolvase RecU protein; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.
  
   
 0.671
ERJ13745.1
Hypothetical protein; Belongs to the UPF0154 family.
 
     0.653
mutSB
MutS2 protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.588
ftnA
Ferritin-like protein; Iron-storage protein.
       0.563
ERJ13566.1
Putative ACR protein.
  
     0.546
yjbK
RNA-thiamine triphosphatase protein.
  
     0.524
ERJ13635.1
Septation ring formation regulator protein.
  
    0.505
ERJ12798.1
Sporulation-specific transcription factor SpoVIF protein.
  
     0.480
ERJ13787.1
Bacterial type II secretion-trafficking system protein.
  
     0.470
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.