STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ13138.1Peptide ABC transporter permease protein. (319 aa)    
Predicted Functional Partners:
ERJ13136.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.987
oppC
Oligopeptide transport system permease protein.
 
 0.983
ERJ13135.1
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 0.976
ERJ13404.1
Oligopeptide ABC transporter permease protein.
 
 0.952
ERJ11649.1
Oligopeptide ABC transporter permease protein.
 
 0.948
ERJ11648.1
Oligopeptide ABC transporter ATPase component protein; Belongs to the ABC transporter superfamily.
 
 0.935
ERJ13405.1
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
 
 0.931
ERJ11647.1
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.910
ERJ13402.1
Oligopeptide ABC transporter protein.
 
 0.903
oppF
Oligopeptide transport ATP-binding protein OppF; Belongs to the ABC transporter superfamily.
 
 0.901
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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