STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxB2Thioredoxin reductase protein. (314 aa)    
Predicted Functional Partners:
gua
Glutaredoxin-like protein.
 
 0.942
ERJ13210.1
Thioredoxin domain-containing protein Posttranslational modification; Belongs to the thioredoxin family.
 
  0.906
selD
Selenide water dikinase protein.
    
 0.794
grdX
GrdX protein.
 
     0.772
selA
L-seryl-tRNA selenium transferase protein; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
  
  
 0.745
selB
Selenocysteine-specific translation elongation factor protein.
     
 0.730
ERJ12828.1
NADH dehydrogenase protein; Belongs to the sulfur carrier protein TusA family.
    
 0.730
ERJ13253.1
NADH dehydrogenase protein.
  
 0.721
ERJ12718.1
Cysteine desulfurase protein.
   
 
 0.645
ERJ13455.1
Two-component system chemotaxis family CheB-CheR fusion protein.
 
 
 0.643
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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