STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ12856.1Glycine betaine transport system permease protein. (295 aa)    
Predicted Functional Partners:
ERJ12144.1
Glycine betaine transport system permease protein.
 
 0.997
ERJ12143.1
Proline-glycine betaine ABC-type transport system ATPase component protein.
 0.988
gbuB
GbuB protein.
 
    
 0.910
ERJ10977.1
Glycine-betaine-L-proline ABC transporter permease protein.
 
    
 0.689
ERJ11418.1
ABC transporter ATP-binding protein.
   
  0.612
proX
ABC transporter substrate binding protein Proline-glycine betaine.
     
 0.444
ERJ10976.1
Glycine betaine-binding protein.
     
 0.444
ERJ13350.1
Putative pyruvate-flavodoxin oxidoreductase protein.
     
 0.425
ERJ13351.1
Putative pyruvate-flavodoxin oxidoreductase protein; Overlaps CDS with the same product name.
     
 0.425
ERJ13352.1
Putative pyruvate-flavodoxin oxidoreductase protein; Overlaps CDS with the same product name.
     
 0.425
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.