STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ12896.1Phosphatidylglycerophosphatase B protein. (239 aa)    
Predicted Functional Partners:
thiE
Thiamine-phosphate synthase protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
   
  0.662
yuzJ
Membrane protein YuzJ.
       0.470
dsbD
Thioldisulfide interchange protein DsbD.
       0.467
ERJ11589.1
Nicotinate phosphoribosyltransferase protein; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
    
  0.465
thiN
Thiamine pyrophosphokinase protein.
    
  0.456
hymB
Putative electron-transferring subunit of iron-only hydrogenase protein.
     
 0.421
hymA
Putative electron-transferring subunit of iron-only hydrogenase protein.
     
 0.414
iscS
Cysteine desulfurase protein.
       0.414
ERJ12894.1
Hypothetical protein.
       0.414
ERJ12689.1
Lipoprotein-releasing system ATP-binding protein; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
    0.407
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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