STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ12948.12-hydroxyglutaryl-CoA dehydratase activator-related protein. (389 aa)    
Predicted Functional Partners:
ERJ12949.1
benzoyl-CoA reductase subunit protein.
   
 0.987
ERJ12950.1
CoA enzyme activase uncharacterized domain protein.
    
0.954
ERJ13290.1
Spore germination protein.
  
     0.590
ERJ12880.1
Hypothetical protein.
  
     0.570
ERJ13292.1
Spore germination protein.
  
    0.555
ERJ11168.1
HutP protein.
  
     0.508
ERJ12947.1
CoA enzyme activase uncharacterized domain protein.
 
    
0.439
ERJ13293.1
Spore germination protein; Overlaps CDS with the same product name.
  
     0.436
ERJ12138.1
ABC-type transporter permease component protein.
  
     0.434
ERJ11491.1
Spore germination protein KB.
  
     0.413
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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