STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ11600.1ABC transporter substrate-binding protein. (827 aa)    
Predicted Functional Partners:
ERJ11601.1
NHL repeat containing protein.
 
    0.949
ERJ11603.1
Binding-protein-dependent transport systems inner membrane component; Overlaps CDS with the same product name.
 
     0.929
ERJ11604.1
Extracellular solute-binding protein family 1.
 
     0.927
ERJ11599.1
Binding-protein-dependent transport systems inner membrane component; Overlaps CDS with the same product name.
 
     0.923
ERJ11602.1
Binding-protein-dependent transport systems inner membrane component.
 
     0.920
ERJ11598.1
Binding-protein-dependent transport systems inner membrane component; Overlaps another CDS with the same product name.
 
     0.859
ERJ13063.1
NHL repeat domain lipoprotein.
 
    0.786
ERJ11737.1
NHL repeat containing protein.
 
     0.786
ERJ11738.1
NHL repeat containing protein; Overlaps CDS with the same product name.
 
     0.778
ERJ13066.1
Extracellular solute-binding protein family 1.
  
     0.775
Your Current Organism:
Haloplasma contractile
NCBI taxonomy Id: 1033810
Other names: H. contractile SSD-17B, Haloplasma contractile SSD-17B, Haloplasma contractile str. SSD-17B, Haloplasma contractile strain SSD-17B
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