STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhNADH dehydrogenase. (403 aa)    
Predicted Functional Partners:
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase.
 
  
 0.951
WANG_0160
Trans-hexaprenyltranstransferase; Belongs to the FPP/GGPP synthase family.
 
  
 0.916
WANG_0158
ABC superfamily ATP binding cassette transporter, ABC/membrane protein.
 
   
 0.790
WANG_0157
ABC superfamily ATP binding cassette transporter, ABC/membrane protein.
 
     0.789
WANG_0156
Cytochrome d ubiquinol oxidase, subunit II.
 
   
 0.647
cydA
Cytochrome d ubiquinol oxidase, subunit I.
 
   
 0.637
gpmA-2
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
   0.616
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
   0.616
WANG_1197
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.482
ldh3
L-2-hydroxyisocaproate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 
 0.425
Your Current Organism:
Lactobacillus kefiranofaciens
NCBI taxonomy Id: 1033837
Other names: L. kefiranofaciens ZW3, Lactobacillus kefiranofaciens ZW3, Lactobacillus kefiranofaciens str. ZW3, Lactobacillus kefiranofaciens strain ZW3
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.