STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WANG_0183Phosphatidylserine decarboxylase; Belongs to the phosphatidylserine decarboxylase family. (427 aa)    
Predicted Functional Partners:
WANG_0583
Cell envelope-associated proteinase; Belongs to the peptidase S8 family.
 
  
 0.697
WANG_0182
Hypothetical protein.
       0.620
pgsA
CDP-diacylglycerol- phosphatephosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 
 0.562
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
  
 0.443
WANG_0237
Bacteriocin helveticin.
  
     0.425
WANG_0181
Mucus binding protein.
       0.415
Your Current Organism:
Lactobacillus kefiranofaciens
NCBI taxonomy Id: 1033837
Other names: L. kefiranofaciens ZW3, Lactobacillus kefiranofaciens ZW3, Lactobacillus kefiranofaciens str. ZW3, Lactobacillus kefiranofaciens strain ZW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.