STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WANG_0362ABC transporter ATP binding and permease protein. (473 aa)    
Predicted Functional Partners:
WANG_0363
ABC transporter ATP binding and permease.
 
    
0.808
WANG_0361
ABC superfamily ATP binding cassette transporter ATP binding and permease protein.
       0.693
WANG_1576
Transcriptional regulator.
  
     0.564
WANG_1207
XRE family transcriptional regulator.
  
     0.507
WANG_0237
Bacteriocin helveticin.
  
     0.474
WANG_0653
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.468
WANG_1062
ABC transporter ATP-binding and permease protein.
 
  
0.460
WANG_0364
Hypothetical protein.
       0.455
WANG_0365
Bacteriophage-related protein.
       0.431
WANG_1360
ABC superfamily ATP binding cassette transporter, membrane protein.
  
  
0.428
Your Current Organism:
Lactobacillus kefiranofaciens
NCBI taxonomy Id: 1033837
Other names: L. kefiranofaciens ZW3, Lactobacillus kefiranofaciens ZW3, Lactobacillus kefiranofaciens str. ZW3, Lactobacillus kefiranofaciens strain ZW3
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