STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WANG_0642Hypothetical protein. (446 aa)    
Predicted Functional Partners:
WANG_1267
Hypothetical protein.
  
  
 
0.901
WANG_0233
Thioredoxin.
  
 0.780
WANG_0640
NAD(FAD)-dependent dehydrogenase.
 
 
0.603
WANG_0643
Major facilitator superfamily transporter permease.
 
   
 0.591
WANG_0644
Sir2 silent information regulator family NAD-dependent deacetylase.
 
 
 0.582
WANG_1883
Cystathionine beta-synthase (CBS) domain protein.
 
   0.577
WANG_0645
Sir2 silent information regulator family NAD-dependent deacetylase.
 
 
 0.525
WANG_0641
MarR family transcriptional regulator.
  
  
 0.520
atpA
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
  
 
 0.508
atpG
ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
  
 
 0.505
Your Current Organism:
Lactobacillus kefiranofaciens
NCBI taxonomy Id: 1033837
Other names: L. kefiranofaciens ZW3, Lactobacillus kefiranofaciens ZW3, Lactobacillus kefiranofaciens str. ZW3, Lactobacillus kefiranofaciens strain ZW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.