STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xerDIntegrase-recombinase; Belongs to the 'phage' integrase family. (273 aa)    
Predicted Functional Partners:
WANG_0498
Hypothetical protein.
  
     0.671
WANG_1213
Beta-lactamase.
  
     0.655
WANG_0499
Hypothetical protein.
  
     0.635
WANG_0536
Lysin.
  
    0.617
pphA
Serine-threonine protein phosphatase.
 
     0.587
WANG_0667
Membrane protein.
  
     0.574
WANG_0678
Hypothetical protein.
 
     0.569
WANG_0491
Enterolysin A.
 
  
 0.552
WANG_1208
Nucleoside deoxyribosyltransferase.
  
     0.550
WANG_0319
Possible nucleoside deoxyribosyltransferase.
  
     0.536
Your Current Organism:
Lactobacillus kefiranofaciens
NCBI taxonomy Id: 1033837
Other names: L. kefiranofaciens ZW3, Lactobacillus kefiranofaciens ZW3, Lactobacillus kefiranofaciens str. ZW3, Lactobacillus kefiranofaciens strain ZW3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.