STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1880_06840Unannotated protein. (348 aa)    
Predicted Functional Partners:
GCA_000236865_00219
Unannotated protein.
 
 0.999
C1880_06830
Unannotated protein.
 
 0.998
C1880_01125
Unannotated protein.
   
 0.997
C1880_07215
Unannotated protein.
  
 0.997
GCA_000236865_00218
Unannotated protein.
 
 0.988
C1880_02285
Unannotated protein.
 
 0.987
C1880_04555
Unannotated protein.
  
 0.982
C1880_01235
Unannotated protein.
  
 0.978
C1880_06835
Unannotated protein; Belongs to the complex I 49 kDa subunit family.
 
 
 0.968
C1880_06845
Unannotated protein.
 
  
 0.944
Your Current Organism:
Senegalimassilia anaerobia
NCBI taxonomy Id: 1034345
Other names: Coriobacteriaceae bacterium JC110, S. anaerobia JC110, Senegalemassilia anaerobia JC110, Senegalimassilia anaerobia JC110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.