STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1880_01180Unannotated protein. (341 aa)    
Predicted Functional Partners:
C1880_07425
Unannotated protein.
  
 0.965
C1880_01185
Unannotated protein.
 
  
  0.878
C1880_01175
Unannotated protein.
       0.773
C1880_09310
Unannotated protein; Belongs to the CoA-transferase III family.
    
  0.736
C1880_05460
Unannotated protein.
  
 0.721
C1880_07735
Unannotated protein.
   
  0.717
prs
Unannotated protein; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
  0.691
C1880_07975
Unannotated protein.
  
  
  0.658
C1880_06060
Unannotated protein.
 
 0.643
C1880_03525
Unannotated protein.
 
 0.622
Your Current Organism:
Senegalimassilia anaerobia
NCBI taxonomy Id: 1034345
Other names: Coriobacteriaceae bacterium JC110, S. anaerobia JC110, Senegalemassilia anaerobia JC110, Senegalimassilia anaerobia JC110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.