Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES51_101296 | DES51_112100 | GCA_000313565_00292 | GCA_000313565_00982 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.542 |
DES51_103173 | DES51_103174 | GCA_000313565_02005 | GCA_000313565_02004 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.994 |
DES51_103173 | DES51_103175 | GCA_000313565_02005 | GCA_000313565_02003 | Unannotated protein. | Unannotated protein. | 0.995 |
DES51_103173 | DES51_112100 | GCA_000313565_02005 | GCA_000313565_00982 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.617 |
DES51_103173 | DES51_11539 | GCA_000313565_02005 | GCA_000313565_03091 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.945 |
DES51_103173 | DES51_11541 | GCA_000313565_02005 | GCA_000313565_03093 | Unannotated protein. | Unannotated protein. | 0.983 |
DES51_103173 | potA | GCA_000313565_02005 | GCA_000313565_01400 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.918 |
DES51_103174 | DES51_103173 | GCA_000313565_02004 | GCA_000313565_02005 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.994 |
DES51_103174 | DES51_103175 | GCA_000313565_02004 | GCA_000313565_02003 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.995 |
DES51_103174 | DES51_112100 | GCA_000313565_02004 | GCA_000313565_00982 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.615 |
DES51_103174 | DES51_11539 | GCA_000313565_02004 | GCA_000313565_03091 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.425 |
DES51_103174 | DES51_11540 | GCA_000313565_02004 | GCA_000313565_03092 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.970 |
DES51_103174 | DES51_11541 | GCA_000313565_02004 | GCA_000313565_03093 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein. | 0.979 |
DES51_103174 | potA | GCA_000313565_02004 | GCA_000313565_01400 | Unannotated protein; Belongs to the ABC transporter superfamily. | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.424 |
DES51_103175 | DES51_103173 | GCA_000313565_02003 | GCA_000313565_02005 | Unannotated protein. | Unannotated protein. | 0.995 |
DES51_103175 | DES51_103174 | GCA_000313565_02003 | GCA_000313565_02004 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.995 |
DES51_103175 | DES51_112100 | GCA_000313565_02003 | GCA_000313565_00982 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.611 |
DES51_103175 | DES51_11539 | GCA_000313565_02003 | GCA_000313565_03091 | Unannotated protein. | Unannotated protein; Belongs to the ABC transporter superfamily. | 0.962 |
DES51_103175 | DES51_11540 | GCA_000313565_02003 | GCA_000313565_03092 | Unannotated protein. | Unannotated protein. | 0.983 |
DES51_103175 | potA | GCA_000313565_02003 | GCA_000313565_01400 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.938 |
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