STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES51_106125Unannotated protein. (277 aa)    
Predicted Functional Partners:
DES51_102189
Unannotated protein.
   
 0.850
DES51_109123
Unannotated protein.
   
 0.805
DES51_106130
Unannotated protein.
  
 
 0.799
DES51_101347
Unannotated protein.
   
 
  0.772
DES51_10528
Unannotated protein.
  
 
 0.769
DES51_105255
Unannotated protein.
   
 
 0.760
DES51_101346
Unannotated protein.
    
 0.752
rsgA
Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
    
  0.737
DES51_11114
Unannotated protein.
    
 0.737
DES51_11140
Unannotated protein.
    
 0.734
Your Current Organism:
Dielma fastidiosa
NCBI taxonomy Id: 1034346
Other names: CSUR P149, Clostridiaceae bacterium JC13, D. fastidiosa, DSM 26099, Dielma fastidiosa Ramasamy et al. 2016, strain JC13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.