STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES51_106130Unannotated protein. (394 aa)    
Predicted Functional Partners:
DES51_103109
Unannotated protein.
 
 
 0.942
DES51_106106
Unannotated protein.
 
 
 0.819
DES51_10338
Unannotated protein.
  
 
 0.815
DES51_10937
Unannotated protein.
    
 0.812
DES51_10328
Unannotated protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.807
DES51_106125
Unannotated protein.
  
 
 0.799
DES51_106128
Unannotated protein; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
  
    0.796
DES51_10897
Unannotated protein.
  
 
 0.793
rdgB
Unannotated protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
       0.793
DES51_106225
Unannotated protein.
  
 
 0.793
Your Current Organism:
Dielma fastidiosa
NCBI taxonomy Id: 1034346
Other names: CSUR P149, Clostridiaceae bacterium JC13, D. fastidiosa, DSM 26099, Dielma fastidiosa Ramasamy et al. 2016, strain JC13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.