Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DES51_103132 | DES51_106139 | GCA_000313565_02046 | GCA_000313565_01193 | Unannotated protein. | Unannotated protein; Essential cell division protein. | 0.920 |
DES51_103132 | DES51_11086 | GCA_000313565_02046 | GCA_000313565_01365 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | 0.933 |
DES51_103132 | DES51_11714 | GCA_000313565_02046 | GCA_000313565_01044 | Unannotated protein. | Unannotated protein. | 0.898 |
DES51_103132 | ddl | GCA_000313565_02046 | GCA_000313565_01372 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.974 |
DES51_103132 | ddl-2 | GCA_000313565_02046 | GCA_000313565_02045 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.993 |
DES51_103132 | murA | GCA_000313565_02046 | GCA_000313565_02411 | Unannotated protein. | Unannotated protein; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily. | 0.737 |
DES51_103132 | murB | GCA_000313565_02046 | GCA_000313565_01192 | Unannotated protein. | Unannotated protein; Cell wall formation. | 0.910 |
DES51_103132 | murD | GCA_000313565_02046 | GCA_000313565_01885 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.934 |
DES51_103132 | murG | GCA_000313565_02046 | GCA_000313565_01191 | Unannotated protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.969 |
DES51_106139 | DES51_103132 | GCA_000313565_01193 | GCA_000313565_02046 | Unannotated protein; Essential cell division protein. | Unannotated protein. | 0.920 |
DES51_106139 | DES51_11086 | GCA_000313565_01193 | GCA_000313565_01365 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | 0.826 |
DES51_106139 | DES51_11714 | GCA_000313565_01193 | GCA_000313565_01044 | Unannotated protein; Essential cell division protein. | Unannotated protein. | 0.723 |
DES51_106139 | ddl | GCA_000313565_01193 | GCA_000313565_01372 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.723 |
DES51_106139 | ddl-2 | GCA_000313565_01193 | GCA_000313565_02045 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.723 |
DES51_106139 | murB | GCA_000313565_01193 | GCA_000313565_01192 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation. | 0.946 |
DES51_106139 | murD | GCA_000313565_01193 | GCA_000313565_01885 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.819 |
DES51_106139 | murF | GCA_000313565_01193 | GCA_000313565_01371 | Unannotated protein; Essential cell division protein. | Unannotated protein; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.920 |
DES51_106139 | murG | GCA_000313565_01193 | GCA_000313565_01191 | Unannotated protein; Essential cell division protein. | Unannotated protein; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.940 |
DES51_11086 | DES51_103132 | GCA_000313565_01365 | GCA_000313565_02046 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein. | 0.933 |
DES51_11086 | DES51_106139 | GCA_000313565_01365 | GCA_000313565_01193 | Unannotated protein; Cell wall formation; Belongs to the MurCDEF family. | Unannotated protein; Essential cell division protein. | 0.826 |
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