STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DES51_109149Unannotated protein. (343 aa)    
Predicted Functional Partners:
DES51_1259
Unannotated protein.
  
  
  0.958
DES51_1102
Unannotated protein.
     
 0.897
DES51_10151
Unannotated protein.
  
  
 
0.881
DES51_11930
Unannotated protein.
  
  
 0.860
DES51_113113
Unannotated protein; Belongs to the peptidase S11 family.
    
 0.839
DES51_11398
Unannotated protein; Belongs to the peptidase S11 family.
    
 0.833
murI
Unannotated protein; Provides the (R)-glutamate required for cell wall biosynthesis.
     
 0.817
DES51_11931
Unannotated protein.
  
 
 0.779
DES51_11353
Unannotated protein.
  
  
 0.765
DES51_108163
Unannotated protein; Belongs to the peptidase S11 family.
    
 0.762
Your Current Organism:
Dielma fastidiosa
NCBI taxonomy Id: 1034346
Other names: CSUR P149, Clostridiaceae bacterium JC13, D. fastidiosa, DSM 26099, Dielma fastidiosa Ramasamy et al. 2016, strain JC13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.