STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000311725_01960Unannotated protein. (449 aa)    
Predicted Functional Partners:
GCA_000311725_01961
Unannotated protein.
 
  
 0.964
GCA_000311725_02017
Unannotated protein.
  
     0.767
GCA_000311725_00493
Unannotated protein.
  
     0.760
GCA_000311725_04809
Unannotated protein.
  
     0.744
GCA_000311725_02102
Unannotated protein.
  
     0.741
GCA_000311725_04808
Unannotated protein.
  
     0.723
GCA_000311725_02104
Unannotated protein.
  
     0.719
GCA_000311725_02370
Unannotated protein.
  
     0.707
GCA_000311725_03348
Unannotated protein.
 
  
 0.695
GCA_000311725_03396
Unannotated protein.
 
  
 0.674
Your Current Organism:
Bacillus massiliosenegalensis
NCBI taxonomy Id: 1034347
Other names: B. massiliosenegalensis JC6, Bacillus massiliosenegalensis JC6, Bacillus sp. JC6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.