STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIG_00100Dihydroxyacetone (glycerone) kinase, DhaK2 subunit; COG1461 Predicted kinase related to dihydroxyacetone kinase. (543 aa)    
Predicted Functional Partners:
GIG_03003
Fatty acid-binding protein DegV-like protein; COG1307 Uncharacterized protein conserved in bacteria.
 
   0.947
GIG_00486
Fatty acid-binding protein DegV-like protein; COG1307 Uncharacterized protein conserved in bacteria.
 
   0.903
plsX
Putative phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.
  
  
 0.829
GIG_00105
Hypothetical protein.
       0.800
smc
Chromosomal segregation and condensation complex, SMC protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
  
    0.673
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.665
GIG_00110
COG1381 Recombinational DNA repair protein (RecF pathway).
       0.637
polC
DNA polymerase III PolC; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.529
GIG_00075
licD family protein; COG3475 LPS biosynthesis protein.
       0.489
GIG_00080
Aminotransferase; COG4750 CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes.
       0.489
Your Current Organism:
Mycoplasma anatis
NCBI taxonomy Id: 1034808
Other names: M. anatis 1340, Mycoplasma anatis 1340, Mycoplasma anatis ATCC 25524
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.