STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIG_01523COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair. (413 aa)    
Predicted Functional Partners:
GIG_02025
COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).
   
 0.996
recA
Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.921
nadD
Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
  
    0.830
GIG_01513
Aminotransferase, class V; COG0520 Selenocysteine lyase.
  
  
 0.825
GIG_01503
COG0781 Transcription termination factor.
     
 0.820
GIG_01518
Nitrogen fixation protein nifu; COG0822 NifU homolog involved in Fe-S cluster formation.
     
 0.818
GIG_03994
Putative 5'-3' exodeoxyribonuclease; COG0258 5'-3' exonuclease (including N-terminal domain of PolI).
  
 0.776
GIG_01508
Hypothetical protein.
       0.773
potA
Spermidine/putrescine transport system ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
  
 0.766
GIG_01498
Hypothetical protein.
       0.765
Your Current Organism:
Mycoplasma anatis
NCBI taxonomy Id: 1034808
Other names: M. anatis 1340, Mycoplasma anatis 1340, Mycoplasma anatis ATCC 25524
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