STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIG_03013Putative membrane nuclease, lipoprotein; COG2374 Predicted extracellular nuclease. (1047 aa)    
Predicted Functional Partners:
GIG_03317
COG0531 Amino acid transporters.
  
 
  0.832
GIG_01174
COG1428 Deoxynucleoside kinases.
  
  
 0.827
GIG_00030
Putative extracellular nuclease, EndA/NucM family protein; COG2356 Endonuclease I.
    
 0.811
GIG_03008
Prolyl aminopeptidase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); Belongs to the peptidase S33 family.
  
 
 0.811
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
    
 0.801
GIG_02798
Cytidine deaminase (cytidine aminohydrolase); This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.787
GIG_00040
COG0213 Thymidine phosphorylase.
    
 0.785
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
 
  0.783
GIG_00456
Putative intrinsic membrane protein.
 
 
 0.774
tdk
COG1435 Thymidine kinase.
    
  0.774
Your Current Organism:
Mycoplasma anatis
NCBI taxonomy Id: 1034808
Other names: M. anatis 1340, Mycoplasma anatis 1340, Mycoplasma anatis ATCC 25524
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