STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GIG_03280dUTP diphosphatase; COG4508 Uncharacterized protein conserved in bacteria. (165 aa)    
Predicted Functional Partners:
GIG_03984
Hypothetical protein; COG3611 Replication initiation/membrane attachment protein.
  
     0.565
thyA
Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.
    
 0.519
GIG_01498
Hypothetical protein.
  
     0.468
GIG_03260
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
    0.455
lspA
Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
  
     0.432
GIG_03250
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein DppF; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.431
GIG_03255
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein DppD/OppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.431
GIG_03265
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
       0.431
GIG_03270
Putative oligopeptide ABC transporter solute binding protein OppA; COG4166 ABC-type oligopeptide transport system, periplasmic component.
       0.431
GIG_03275
Hypothetical protein.
       0.431
Your Current Organism:
Mycoplasma anatis
NCBI taxonomy Id: 1034808
Other names: M. anatis 1340, Mycoplasma anatis 1340, Mycoplasma anatis ATCC 25524
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