STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEG08640.1TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein. (772 aa)    
Predicted Functional Partners:
CEG07729.1
Protein TolA.
  
 
 0.704
CEG08593.1
Hypothetical protein; TonB family C-terminal domain.
  
 
 0.704
CEG09392.1
Protein TolA.
  
 
 0.704
CEG08641.1
High-affinity nickel-transport protein.
 
     0.626
CEG08244.1
Putative protein with a C-terminal OMP (outer membrane protein) domain.
  
 
 
 0.591
pfeA
Ferric enterobactin receptor precursor.
  
     0.584
CEG07876.1
Thiol-disulfide oxidoreductase.
 
     0.520
CEG08642.1
ATP-utilizing enzymes of the PP-loop superfamily protein.
       0.509
CEG08643.1
Hypothetical protein.
       0.509
CEG10540.1
Hypothetical protein.
  
 
   0.500
Your Current Organism:
Afipia felis
NCBI taxonomy Id: 1035
Other names: A. felis, AFIP strain BV, ATCC 53690, CCUG 30456, CIP 103515, DSM 7326, LMG 18884, LMG:18884, NCTC 12499, cat scratch disease bacillus, strain B-91-007352
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.