Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fbiBCoenzyme F420:L-glutamate ligase. (185 aa)    
Predicted Functional Partners:
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
 
 0.880
chaB
Cation transport regulator ChaB.
 
     0.669
ybhF_1
Putative ABC transporter ATP-binding protein YbhF.
  
  
 0.652
yhhJ
Inner membrane transport permease YhhJ.
  
    0.610
yadH
Inner membrane transport permease YadH.
  
    0.610
ybhS
Inner membrane transport permease YbhS.
  
    0.610
ybhR
Inner membrane transport permease YbhR.
  
    0.610
CEG07741.1
CAAX amino terminal protease self-immunity.
  
  
 0.600
pcm_3
Protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
  
  
 0.594
ribBA
Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
   
 
 0.561
Your Current Organism:
Afipia felis
NCBI taxonomy Id: 1035
Other names: A. felis, AFIP strain BV, ATCC 53690, CCUG 30456, CIP 103515, DSM 7326, LMG 18884, LMG:18884, NCTC 12499, cat scratch disease bacillus, strain B-91-007352
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