STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdhA_3Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (606 aa)    
Predicted Functional Partners:
frdB_1
Fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.999
frdB_2
Fumarate reductase iron-sulfur subunit.
 
 0.999
sdhB
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.999
CEG10207.1
Succinate dehydrogenase cytochrome b556 large membrane subunit.
 
 0.999
CEG08823.1
Succinate dehydrogenase, cytochrome b556 subunit.
  
 0.992
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
 
 0.973
fumA
Fumarate hydratase class I, aerobic.
  
 
 0.966
CEG08824.1
Succinate dehydrogenase/Fumarate reductase transmembrane subunit.
  
 0.957
sucA
2-oxoglutarate dehydrogenase E1 component.
  
 0.954
hndC
NADP-reducing hydrogenase subunit HndC.
  
 
 0.942
Your Current Organism:
Afipia felis
NCBI taxonomy Id: 1035
Other names: A. felis, AFIP strain BV, ATCC 53690, CCUG 30456, CIP 103515, DSM 7326, LMG 18884, LMG:18884, NCTC 12499, cat scratch disease bacillus, strain B-91-007352
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