STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKX88684.1KEGG: bvu:BVU_3537 8.3e-141 carboxynorspermidine decarboxylase; K13747 carboxynorspermidine decarboxylase; Psort location: Cytoplasmic, score: 7.50. (393 aa)    
Predicted Functional Partners:
EKX92239.1
KEGG: pru:PRU_0067 7.3e-181 lys1; saccharopine dehydrogenase; Psort location: Cytoplasmic, score: 7.50.
 
 
 0.876
EKX92898.1
Homoserine dehydrogenase; KEGG: bth:BT_2403 1.6e-242 thrA; bifunctional aspartokinase I/homeserine dehydrogenase I; K12524 bifunctional aspartokinase/homoserine dehydrogenase 1; Psort location: Cytoplasmic, score: 7.50.
  
 
 0.780
EKX92634.1
Flavodoxin-like protein; KEGG: ccv:CCV52592_0505 8.1e-40 general stress protein 14 (GSP14); Psort location: Cytoplasmic, score: 7.50.
    
  0.667
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.568
EKX94347.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
    
 0.531
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
     
 0.530
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
     
 0.489
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.479
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.461
EKX93789.1
KEGG: cyb:CYB_1515 0.00041 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial.
   
  0.452
Your Current Organism:
Prevotella sp. F0040
NCBI taxonomy Id: 1035197
Other names: P. sp. oral taxon 473 str. F0040, Prevotella sp. oral taxon 473 str. F0040, Prevotella sp. oral taxon 473 strain F0040
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.