STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFIMG_002683RAUncharacterized protein. (482 aa)    
Predicted Functional Partners:
RSM24
37S ribosomal protein S24, mitochondrial.
   
 0.999
rpsO
30S ribosomal protein S15.
   
 0.999
MRP17
37S ribosomal protein MRP17, mitochondrial.
   
 0.999
MRP2
37S ribosomal protein MRP2, mitochondrial.
    
 0.999
MRP4
37S ribosomal protein MRP4, mitochondrial.
   
 0.999
mrps18
Putative 37S ribosomal protein S18, mitochondrial.
   
 0.999
mrp5
Putative 37S ribosomal protein S5, mitochondrial; Belongs to the universal ribosomal protein uS5 family.
   
 0.999
MRPS16
37S ribosomal protein S16, mitochondrial.
   
 0.999
CFIMG_002427RA
Ribosomal_S7 domain-containing protein.
   
 0.999
RPS20
40S ribosomal protein S20.
   
 0.999
Your Current Organism:
Ceratocystis fimbriata
NCBI taxonomy Id: 1035309
Other names: C. fimbriata CBS 114723, Ceratocystis fimbriata C1421, Ceratocystis fimbriata CBS 114723, Ceratocystis fimbriata CBS114723
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.