STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU72811.1PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. (934 aa)    
Predicted Functional Partners:
SFU59310.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.983
SFU64845.1
Signal transduction histidine kinase.
  
 0.977
SFU28528.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
0.975
SFV18081.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.974
SFU45399.1
Signal transduction histidine kinase.
 
 0.973
SFU98187.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.968
SFV15631.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.968
SFU43685.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s).
 
0.967
SFU44577.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.966
SFU67593.1
Signal transduction histidine kinase.
 
 0.966
Your Current Organism:
Massilia namucuonensis
NCBI taxonomy Id: 1035707
Other names: CGMCC 1.11014, DSM 25159, M. namucuonensis, Massilia namucuonensis Kong et al. 2013, Massilia sp. 333-1-0411, strain 333-1-0411
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.