Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DPV93_00110 | DPV93_01260 | GCA_000238795_00102 | GCA_000238795_00608 | Unannotated protein. | Unannotated protein. | 0.999 |
DPV93_00110 | DPV93_04855 | GCA_000238795_00102 | GCA_000238795_01276 | Unannotated protein. | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.608 |
DPV93_00110 | folE | GCA_000238795_00102 | GCA_000238795_00376 | Unannotated protein. | Unannotated protein. | 0.763 |
DPV93_00110 | guaB | GCA_000238795_00102 | GCA_000238795_01525 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.505 |
DPV93_00110 | ribBA | GCA_000238795_00102 | GCA_000238795_01058 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.890 |
DPV93_01260 | DPV93_00110 | GCA_000238795_00608 | GCA_000238795_00102 | Unannotated protein. | Unannotated protein. | 0.999 |
DPV93_01260 | DPV93_04855 | GCA_000238795_00608 | GCA_000238795_01276 | Unannotated protein. | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.418 |
DPV93_01260 | folE | GCA_000238795_00608 | GCA_000238795_00376 | Unannotated protein. | Unannotated protein. | 0.751 |
DPV93_01260 | guaB | GCA_000238795_00608 | GCA_000238795_01525 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.767 |
DPV93_01260 | ribBA | GCA_000238795_00608 | GCA_000238795_01058 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.863 |
DPV93_04855 | DPV93_00110 | GCA_000238795_01276 | GCA_000238795_00102 | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Unannotated protein. | 0.608 |
DPV93_04855 | DPV93_01260 | GCA_000238795_01276 | GCA_000238795_00608 | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Unannotated protein. | 0.418 |
DPV93_04855 | guaB | GCA_000238795_01276 | GCA_000238795_01525 | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.539 |
DPV93_04855 | ribBA | GCA_000238795_01276 | GCA_000238795_01058 | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.888 |
DPV93_04855 | ribD | GCA_000238795_01276 | GCA_000238795_01061 | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Unannotated protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.854 |
DPV93_04855 | ribH | GCA_000238795_01276 | GCA_000238795_01057 | Unannotated protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Unannotated protein; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family. | 0.734 |
folE | DPV93_00110 | GCA_000238795_00376 | GCA_000238795_00102 | Unannotated protein. | Unannotated protein. | 0.763 |
folE | DPV93_01260 | GCA_000238795_00376 | GCA_000238795_00608 | Unannotated protein. | Unannotated protein. | 0.751 |
folE | folK | GCA_000238795_00376 | GCA_000238795_00764 | Unannotated protein. | Unannotated protein. | 0.974 |
folE | ribBA | GCA_000238795_00376 | GCA_000238795_01058 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.865 |
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