Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0W2G3_9ACTO | C0W537_9ACTO | GCA_001067145_01338 | GCA_001067145_01998 | Unannotated protein; Belongs to the DapA family. | Unannotated protein; Belongs to the aspartokinase family. | 0.721 |
C0W2G3_9ACTO | C0W8P5_9ACTO | GCA_001067145_01338 | GCA_001067145_01878 | Unannotated protein; Belongs to the DapA family. | Unannotated protein. | 0.956 |
C0W2G3_9ACTO | asd | GCA_001067145_01338 | GCA_001067145_01997 | Unannotated protein; Belongs to the DapA family. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.970 |
C0W2G3_9ACTO | dapA | GCA_001067145_01338 | GCA_001067145_00944 | Unannotated protein; Belongs to the DapA family. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.947 |
C0W2G3_9ACTO | dapB | GCA_001067145_01338 | GCA_001067145_00942 | Unannotated protein; Belongs to the DapA family. | Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.982 |
C0W2G3_9ACTO | dapD | GCA_001067145_01338 | GCA_001067145_01940 | Unannotated protein; Belongs to the DapA family. | Unannotated protein; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.484 |
C0W2G3_9ACTO | dapF | GCA_001067145_01338 | GCA_001067145_01216 | Unannotated protein; Belongs to the DapA family. | Unannotated protein. | 0.593 |
C0W2G3_9ACTO | lysA | GCA_001067145_01338 | GCA_001067145_01876 | Unannotated protein; Belongs to the DapA family. | Unannotated protein. | 0.625 |
C0W319_9ACTO | asd | GCA_001067145_00448 | GCA_001067145_01997 | Unannotated protein; Belongs to the RecO family. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.676 |
C0W537_9ACTO | C0W2G3_9ACTO | GCA_001067145_01998 | GCA_001067145_01338 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Belongs to the DapA family. | 0.721 |
C0W537_9ACTO | C0W8P5_9ACTO | GCA_001067145_01998 | GCA_001067145_01878 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.987 |
C0W537_9ACTO | asd | GCA_001067145_01998 | GCA_001067145_01997 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.999 |
C0W537_9ACTO | dapA | GCA_001067145_01998 | GCA_001067145_00944 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.817 |
C0W537_9ACTO | dapB | GCA_001067145_01998 | GCA_001067145_00942 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.896 |
C0W537_9ACTO | dapD | GCA_001067145_01998 | GCA_001067145_01940 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA. | 0.788 |
C0W537_9ACTO | dapF | GCA_001067145_01998 | GCA_001067145_01216 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.844 |
C0W537_9ACTO | lysA | GCA_001067145_01998 | GCA_001067145_01876 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.877 |
C0W8P5_9ACTO | C0W2G3_9ACTO | GCA_001067145_01878 | GCA_001067145_01338 | Unannotated protein. | Unannotated protein; Belongs to the DapA family. | 0.956 |
C0W8P5_9ACTO | C0W537_9ACTO | GCA_001067145_01878 | GCA_001067145_01998 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.987 |
C0W8P5_9ACTO | asd | GCA_001067145_01878 | GCA_001067145_01997 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.994 |
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