STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60764.1COG1802 Transcriptional regulators. (229 aa)    
Predicted Functional Partners:
AFK63785.1
COG1802 Transcriptional regulators.
  
     0.775
AFK63680.1
COG1802 Transcriptional regulators.
  
     0.772
AFK64016.1
COG1802 Transcriptional regulators.
  
     0.771
AFK64080.1
COG1802 Transcriptional regulators.
  
     0.771
AFK64457.1
COG2186 Transcriptional regulators.
  
  
 0.771
AFK64168.1
COG2186 Transcriptional regulators.
  
  
 0.756
AFK61829.1
COG2186 Transcriptional regulators.
  
  
 0.739
AFK63357.1
COG2186 Transcriptional regulators.
  
  
 0.731
AFK62668.1
COG2186 Transcriptional regulators.
  
  
 0.724
AFK64163.1
COG2186 Transcriptional regulators.
  
  
 0.705
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.