STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60767.1COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases. (346 aa)    
Predicted Functional Partners:
AFK63918.1
Zinc-binding dehydrogenase family protein 3; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  
 0.718
AFK64033.1
Alcohol dehydrogenase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  
 0.684
AFK60768.1
COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
  
  
 0.657
AFK62629.1
Alcohol dehydrogenase; COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases.
 
  
 0.631
AFK62947.1
Zinc-binding dehydrogenase family protein 6; COG1064 Zn-dependent alcohol dehydrogenases.
 
 
0.491
AFK61178.1
Hypothetical protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
  
 
 0.449
AFK60766.1
COG3181 Uncharacterized protein conserved in bacteria.
       0.448
AFK62810.1
COG2124 Cytochrome P450.
  
  
 0.440
AFK63182.1
COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
  
0.429
AFK62808.1
Oxidoreductase; COG0656 Aldo/keto reductases, related to diketogulonate reductase.
  
 
 0.406
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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