STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60786.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
AFK60785.1
Endoribonuclease L-PSP; COG0251 Putative translation initiation inhibitor, yjgF family.
 
     0.653
AFK61770.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.489
AFK60787.1
COG0640 Predicted transcriptional regulators.
  
  
 0.476
AFK60788.1
Arsenical resistance protein ArsH; COG0431 Predicted flavoprotein.
     
 0.471
AFK60789.1
Arsenate reductase; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.471
AFK60790.1
ACR3 family arsenic transporter protein; COG0798 Arsenite efflux pump ACR3 and related permeases.
       0.469
AFK62874.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.469
AFK63995.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.466
AFK64589.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.465
AFK62834.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.455
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.