STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60802.1Peptidyl-prolyl cis-trans isomerase domain-containing protein; COG0760 Parvulin-like peptidyl-prolyl isomerase. (248 aa)    
Predicted Functional Partners:
AFK60800.1
COG2180 Nitrate reductase delta subunit.
 
    0.908
AFK60801.1
COG2181 Nitrate reductase gamma subunit.
 
  
 0.897
narH
COG1140 Nitrate reductase beta subunit.
 
     0.824
AFK60803.1
Nitrite extrusion protein; COG2223 Nitrate/nitrite transporter.
 
  
 0.803
narZ-2
COG5013 Nitrate reductase alpha subunit.
 
    0.729
narZ-3
COG5013 Nitrate reductase alpha subunit.
 
    0.678
AFK60796.1
COG5013 Nitrate reductase alpha subunit.
 
    0.666
narZ
COG5013 Nitrate reductase alpha subunit.
 
   
 0.594
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
 
  
 0.512
AFK62467.1
COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.450
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.