STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60842.1COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases. (102 aa)    
Predicted Functional Partners:
AFK60841.1
3-phenylpropionate dioxygenase ferredoxin-NAD(+) reductase component; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 0.995
AFK60840.1
Ring hydroxylating alpha subunit; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
  
 0.978
AFK61010.1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.909
AFK62243.1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.909
AFK61680.1
Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.892
AFK60839.1
Ring hydroxylating subunit beta family protein 4; COG5517 Small subunit of phenylpropionate dioxygenase.
 
  
 0.819
AFK63878.1
Hypothetical protein.
   
   0.595
AFK60800.1
COG2180 Nitrate reductase delta subunit.
  
  
 0.503
AFK60801.1
COG2181 Nitrate reductase gamma subunit.
  
  
 0.498
AFK62424.1
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
  
 0.491
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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