STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60846.1NMT1/THI5-like family protein 3; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (290 aa)    
Predicted Functional Partners:
AFK60847.1
ABC transporter ATP-binding protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 0.893
AFK62381.1
Type cbb3 cytochrome oxidase biogenesis protein CcoI; COG2217 Cation transport ATPase.
  
   
 0.591
AFK61380.1
Binding-protein-dependent transporter inner membrane component family protein 56; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
 0.586
AFK60844.1
Oxidoreductase, medium chain; COG1319 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs.
 
    0.508
AFK61379.1
COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
  
 0.504
AFK61378.1
Hypothetical protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
  
     0.464
AFK60845.1
Iron-sulfur binding protein; COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
       0.436
AFK60763.1
Luciferase-type oxidoreductase; COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases.
 
  
 0.432
AFK61146.1
Binding-protein-dependent transport system inner membrane protein; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
  
 0.429
AFK61319.1
Binding-protein-dependent transporter inner membrane component family protein 39; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
  
 0.429
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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