STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60887.1COG4312 Uncharacterized protein conserved in bacteria. (257 aa)    
Predicted Functional Partners:
AFK60888.1
Hypothetical protein; COG3823 Glutamine cyclotransferase.
 
     0.913
AFK60889.1
Hypothetical protein.
 
     0.888
AFK60886.1
Hypothetical protein.
 
     0.789
AFK64354.1
Cupin; COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
  
     0.542
AFK60935.1
3-demethylubiquinone-9 3-methyltransferase; COG3865 Uncharacterized protein conserved in bacteria.
 
     0.475
AFK63305.1
Hypothetical protein.
  
     0.461
AFK60758.1
COG5516 Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.436
AFK60750.1
Glutathione-dependent formaldehyde-activating GFA.
  
     0.405
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.