STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60889.1Hypothetical protein. (406 aa)    
Predicted Functional Partners:
AFK60888.1
Hypothetical protein; COG3823 Glutamine cyclotransferase.
 
     0.920
AFK60887.1
COG4312 Uncharacterized protein conserved in bacteria.
 
     0.888
AFK60886.1
Hypothetical protein.
 
     0.709
AFK64512.1
His Kinase A phosphoacceptor domain-containing protein 13; COG4252 Predicted transmembrane sensor domain.
  
 
 0.606
AFK62500.1
Two-component sensor kinase; COG2202 FOG: PAS/PAC domain.
  
 
 0.580
AFK62217.1
COG0625 Glutathione S-transferase; Belongs to the GST superfamily.
  
   
 0.510
AFK64290.1
Hypothetical protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
  
 
 
 0.509
AFK60890.1
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
       0.505
AFK63737.1
COG0625 Glutathione S-transferase.
  
   
 0.503
AFK60792.1
COG0642 Signal transduction histidine kinase.
  
 
 0.483
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.