STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFK60937.1COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (507 aa)    
Predicted Functional Partners:
AFK62179.1
AMP-dependent synthetase/ligase; COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
 0.931
AFK62294.1
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
 0.931
AFK63145.1
COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
  
 0.931
AFK62161.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.922
AFK63182.1
COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
 0.918
AFK62947.1
Zinc-binding dehydrogenase family protein 6; COG1064 Zn-dependent alcohol dehydrogenases.
  
 
 0.916
AFK60944.1
Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase.
   
 
 0.904
AFK61032.1
COG1042 Acyl-CoA synthetase (NDP forming).
    
 0.901
AFK62118.1
ATP-grasp domain-containing protein 3; COG1042 Acyl-CoA synthetase (NDP forming).
    
 0.901
AFK62162.1
CoA-binding domain-containing protein; COG1042 Acyl-CoA synthetase (NDP forming).
    
 0.901
Your Current Organism:
Advenella kashmirensis WT001
NCBI taxonomy Id: 1036672
Other names: A. kashmirensis WT001, Advenella kashmirensis str. WT001, Advenella kashmirensis strain WT001, Tetrathiobacter kashmirensis WT001
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